GNNs Improve Scalable and Transferable Node Centrality Approximation

Samra Sana, Giorgio Mantica, Saul Imbrici· July 13, 2026 View original

Summary

This paper explores GNNs for approximating betweenness and closeness centrality, achieving high rank correlation and significant speedups over exact computation. Mixed-distribution training improves transferability across graph families, though closeness centrality remains sensitive to topology.

Calculating exact node centrality measures like betweenness and closeness in large graphs is computationally expensive. Graph Neural Networks (GNNs) offer a learning-based alternative for approximating these quantities, framing it as a node-ranking problem. This research investigates the ability of message-passing GNNs to learn transferable structural representations across different graph topologies, rather than just fitting the training distribution. Using exact centrality values as supervision, the GNN models achieved high Kendall's tau rank correlation scores: 0.851 for betweenness and 0.894 for closeness on unseen Erdos-Renyi graphs. A large-scale betweenness model trained on graphs with 5,000 nodes demonstrated scalability with a tau of 0.938. Mixed-distribution training, involving Erdos-Renyi, Barabasi-Albert, and Gaussian Random Partition graphs, significantly improved betweenness transfer across different graph families. However, closeness centrality proved more sensitive to community-structured graphs and showed reduced transferability to real-world topologies. Crucially, GNN inference achieved up to a 97.7x speedup compared to exact centrality computation, highlighting their practical utility for large-scale graph analysis.

Why it matters

For professionals working with large and complex networks (social, biological, infrastructure), GNNs provide a significantly faster and scalable method to approximate critical node centrality measures, enabling quicker insights and more efficient decision-making without sacrificing too much accuracy.

How to implement this in your domain

  1. 1Integrate GNN-based centrality approximation into your network analysis tools for large-scale graph datasets.
  2. 2Apply these GNNs to identify influential nodes in social networks, critical components in infrastructure, or key proteins in biological networks.
  3. 3Utilize mixed-distribution training strategies to improve the transferability of your GNN models across diverse graph types.
  4. 4Benchmark GNN inference speed against traditional exact centrality algorithms to quantify efficiency gains in your applications.

Who benefits

Social MediaTelecommunicationsCybersecurityHealthcareLogistics

Key takeaways

  • GNNs can efficiently approximate expensive node centrality measures like betweenness and closeness.
  • They achieve high ranking quality and significant speedups over exact computation.
  • Mixed-distribution training enhances the transferability of betweenness centrality across graph families.
  • Closeness centrality approximation remains more sensitive to graph topology and real-world transfer.

Original post by Samra Sana, Giorgio Mantica, Saul Imbrici

"arXiv:2607.09372v1 Announce Type: new Abstract: Graph Neural Networks (GNNs) provide a learning-based framework for approximating graph quantities that are expensive to compute exactly. This paper investigates GNNs for scalable approximation of betweenness and closeness centralit…"

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Originally posted by Samra Sana, Giorgio Mantica, Saul Imbrici on X · view source

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